BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002A11LP1|AL424895
(910 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1694 1771 0.0
>3x_Contig1694
Length = 18020
Score = 1771 bits (892), Expect = 0.0
Identities = 905/909 (99%), Gaps = 1/909 (0%)
Strand = Plus / Minus
Query: 3 aagctggtggtgccggtggaccaggcggtgcctatggcggtgctggtgctggtggtgcac 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15078 aagctggtggtgccggtggaccaggcggtgcctatggcggtgctggtgctggtggtgcac 15019
Query: 63 aaggattcggaggctttggagggttcgatttcggtggattgaactttgaagatcttttcg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15018 aaggattcggaggctttggagggttcgatttcggtggattgaactttgaagatcttttcg 14959
Query: 123 gaagtgcgtttggtggtggtggtggtggtggtgccggagggng-agagctggttcgcatg 181
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 14958 gaagtgcgtttggtggtggtggtggtggtggtgccggaggcaggagagctggttcgcatg 14899
Query: 182 gagcaggatttggcggttccgattttgtccgtgaatataaaggtgagaatgtcactgtac 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14898 gagcaggatttggcggttccgattttgtccgtgaatataaaggtgagaatgtcactgtac 14839
Query: 242 cattccaagtatccttcaaagatgccgtcttcggtgtgaagaatgtcaaattgaattacc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14838 cattccaagtatccttcaaagatgccgtcttcggtgtgaagaatgtcaaattgaattacc 14779
Query: 302 aatgctacgatccgtgttcgtcatgtgatggaagtgggttgaaagctggacattcgagaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14778 aatgctacgatccgtgttcgtcatgtgatggaagtgggttgaaagctggacattcgagaa 14719
Query: 362 gtgtttgtcctacatgtcatggtacaggtactcaggtacatgtaagagcaggtttccaaa 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14718 gtgtttgtcctacatgtcatggtacaggtactcaggtacatgtaagagcaggtttccaaa 14659
Query: 422 tggcctctacttgtcaaacatgtgatggtgagggttcaactattaaggacagcgataaat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14658 tggcctctacttgtcaaacatgtgatggtgagggttcaactattaaggacagcgataaat 14599
Query: 482 gtggtacctgtcatagccacggtttcaaattgaattcaaataaaactatcaccgtagact 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14598 gtggtacctgtcatagccacggtttcaaattgaattcaaataaaactatcaccgtagact 14539
Query: 542 tacctcacggacttcaggacggtgacacaattagagtacctaaccaaggtagttaccccg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14538 tacctcacggacttcaggacggtgacacaattagagtacctaaccaaggtagttaccccg 14479
Query: 602 gtatggctatcgatccgtccatgaaatctgaattgcatttaaccagaggcgatttgttga 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14478 gtatggctatcgatccgtccatgaaatctgaattgcatttaaccagaggcgatttgttga 14419
Query: 662 ttcgtgtcagagtcaggaaagacacaagattccaagtttcaaataattacgacatcattt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14418 ttcgtgtcagagtcaggaaagacacaagattccaagtttcaaataattacgacatcattt 14359
Query: 722 acactcaggaaatcccaattacaacggcagcactaggtggcgtcattgaagtacccaccg 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14358 acactcaggaaatcccaattacaacggcagcactaggtggcgtcattgaagtacccaccg 14299
Query: 782 tagaggaagaaaagatcagattgaaggtcagctctggtactcaacacgatcaagtcatca 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14298 tagaggaagaaaagatcagattgaaggtcagctctggtactcaacacgatcaagtcatca 14239
Query: 842 gaattccaaataagggtgtccctcgtggagctagaggtgacaggggtgacatgcttktca 901
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 14238 gaattccaaataagggtgtccctcgtggagctagaggtgacaggggtgacatgcttgtca 14179
Query: 902 agttcaaga 910
|||||||||
Sbjct: 14178 agttcaaga 14170
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5792
Number of Sequences: 1807
Number of extensions: 5792
Number of successful extensions: 89
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)